STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrYNitrogen regulation protein/Sensor Histidine Kinase NtrY; Name change according to the cited literature. PMID: 16882029. (700 aa)    
Predicted Functional Partners:
ntrX
Response Regulator NtrX, putative nitrogen assimilation regulatory protein; Name change according to the cited literature. PMID: 16882029.
 0.999
ctrA
DNA-binding response regulator CtrA; Name change according to the cited literature. PMID: 16882029.
   
 
 0.946
APH_0137
Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF01612.
       0.792
cckA
Sensor histidine kinase/response regulator CckA; Name change according to the cited literature. PMID: 16882029.
 
 
0.776
pleD
Response regulator/GGDEF domain protein PleD; Name change according to the cited literature. PMID: 16882029.
     
 0.721
APH_0135
Cold shock protein, CSD family; Identified by match to protein family HMM PF00313.
  
    0.716
APH_1398
Putative dnaK suppressor protein; Identified by similarity to SP:P18274; match to protein family HMM PF01258.
 
     0.492
pleC
Sensor histidine kinase PleC; Name change according to the cited literature. PMID: 16882029.
 
 
 
0.450
glnA
Glutamine synthetase, type I; Identified by similarity to SP:P05457; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
      
 0.441
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.