Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xerCTyrosine recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. (319 aa)    
Predicted Functional Partners:
APH_1303
comF family protein.
   
    0.714
rpsU
Ribosomal protein S21; Identified by match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.637
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:P12046; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.
  
  
 0.616
APH_0090
Putative 50S ribosomal protein L31; Identified by similarity to SP:Q03223; Belongs to the bacterial ribosomal protein bL31 family.
    
 
 0.613
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
 
 0.609
rplY
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
 
   0.592
rpsI
Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.589
rpmG
Ribosomal protein L33; Identified by similarity to SP:P02436; match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.573
rpsL
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
    
 
 0.572
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
 
 0.567
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.