Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APH_0608ppiC/parvulin rotamase family protein; Identified by similarity to SP:P77241. (601 aa)    
Predicted Functional Partners:
bamA
Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.844
APH_0849
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
  
     0.712
APH_0392
PQQ enzyme repeat domain protein.
   
 
 0.692
bamD
Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.677
APH_0110
Acetamidase/formamidase family protein.
  
     0.658
APH_0976
Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1.
  
     0.591
APH_0195
Cell division protein FtsQ; Identified by match to protein family HMM PF03799.
  
  
 0.576
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
   0.560
APH_0601
Conserved hypothetical protein; Identified by similarity to GB:AAS13958.1.
   
 
 0.557
APH_1339
Conserved domain protein.
  
   
 0.534
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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