| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APH_0110 | APH_0627 | APH_0110 | APH_0627 | Acetamidase/formamidase family protein. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.426 |
| APH_0110 | APH_1316 | APH_0110 | APH_1316 | Acetamidase/formamidase family protein. | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.445 |
| APH_0110 | APH_1323 | APH_0110 | APH_1323 | Acetamidase/formamidase family protein. | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | 0.690 |
| APH_0627 | APH_0110 | APH_0627 | APH_0110 | RDD family protein; Identified by match to protein family HMM PF06271. | Acetamidase/formamidase family protein. | 0.426 |
| APH_0627 | APH_1316 | APH_0627 | APH_1316 | RDD family protein; Identified by match to protein family HMM PF06271. | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.457 |
| APH_0627 | APH_1323 | APH_0627 | APH_1323 | RDD family protein; Identified by match to protein family HMM PF06271. | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | 0.469 |
| APH_0627 | folB | APH_0627 | APH_0628 | RDD family protein; Identified by match to protein family HMM PF06271. | Dihydroneopterin aldolase; Identified by similarity to SP:P46362; match to protein family HMM PF02152; match to protein family HMM TIGR00526. | 0.580 |
| APH_0627 | ispB | APH_0627 | APH_1247 | RDD family protein; Identified by match to protein family HMM PF06271. | Octaprenyl-diphosphate synthase; Identified by similarity to SP:P19641; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.472 |
| APH_0627 | mdh | APH_0627 | APH_0629 | RDD family protein; Identified by match to protein family HMM PF06271. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.426 |
| APH_0627 | virB8-1 | APH_0627 | APH_1406 | RDD family protein; Identified by match to protein family HMM PF06271. | Type IV secretion protein VirB8-1; Name change from VirB8-2 to VirB8-1. PMID: 20670295. | 0.511 |
| APH_1316 | APH_0110 | APH_1316 | APH_0110 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Acetamidase/formamidase family protein. | 0.445 |
| APH_1316 | APH_0627 | APH_1316 | APH_0627 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.457 |
| APH_1323 | APH_0110 | APH_1323 | APH_0110 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | Acetamidase/formamidase family protein. | 0.690 |
| APH_1323 | APH_0627 | APH_1323 | APH_0627 | Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.469 |
| folB | APH_0627 | APH_0628 | APH_0627 | Dihydroneopterin aldolase; Identified by similarity to SP:P46362; match to protein family HMM PF02152; match to protein family HMM TIGR00526. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.580 |
| folB | mdh | APH_0628 | APH_0629 | Dihydroneopterin aldolase; Identified by similarity to SP:P46362; match to protein family HMM PF02152; match to protein family HMM TIGR00526. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.609 |
| ispB | APH_0627 | APH_1247 | APH_0627 | Octaprenyl-diphosphate synthase; Identified by similarity to SP:P19641; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.472 |
| mdh | APH_0627 | APH_0629 | APH_0627 | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.426 |
| mdh | folB | APH_0629 | APH_0628 | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | Dihydroneopterin aldolase; Identified by similarity to SP:P46362; match to protein family HMM PF02152; match to protein family HMM TIGR00526. | 0.609 |
| virB8-1 | APH_0627 | APH_1406 | APH_0627 | Type IV secretion protein VirB8-1; Name change from VirB8-2 to VirB8-1. PMID: 20670295. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.511 |