STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_0683Conserved hypothetical protein; Identified by similarity to GB:AAS14108.1. (879 aa)    
Predicted Functional Partners:
APH_0378
Identified by similarity to GB:AAS14953.1; match to protein family HMM TIGR02217.
 
 
   0.929
APH_0688
Phage conserved hypothetical protein BR0599; Identified by match to protein family HMM TIGR02218.
 
 
   0.929
APH_0861
Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.
 
 
   0.890
APH_0091
Conserved domain protein.
 
 
   0.876
APH_0023
Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.
 
 
   0.874
APH_0634
Phage conserved hypothetical protein, phiE125 gp8 family; Identified by match to protein family HMM TIGR02215.
 
 
   0.867
APH_0022
Phage prohead protease, HK97 family; Identified by similarity to SP:P49860; match to protein family HMM PF04586; match to protein family HMM TIGR01543.
 
     0.750
APH_0352
Conserved hypothetical protein; Identified by similarity to GB:AAS13980.1; match to protein family HMM TIGR02281.
  
     0.555
cckA
Sensor histidine kinase/response regulator CckA; Name change according to the cited literature. PMID: 16882029.
   
 
 0.516
APH_0256
Type I secretion system ATPase/hypothetical protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01842.
 
 
 0.504
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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