Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (245 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
   
 
 0.934
APH_1218
DNA-binding protein; Identified by similarity to GB:AAN15209.1; match to protein family HMM PF01381.
  
  
 0.775
APH_0258
ATP-dependent DNA helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580.
 
   
 0.774
APH_0775
Conserved hypothetical protein; Identified by similarity to PIR:E97838; match to protein family HMM PF07031.
  
     0.760
APH_0062
Conserved hypothetical protein; Identified by similarity to GB:AAL02641.1; match to protein family HMM PF06242.
  
     0.735
APH_0994
Conserved hypothetical protein; Identified by similarity to GB:AAS14796.1; Belongs to the DnaA family.
  
   
 0.734
holA
DNA polymerase III, delta subunit; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144.
  
   
 0.726
APH_0096
Tim44-like domain protein; Identified by match to protein family HMM PF04280.
  
     0.710
recF
Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
  
 
 
 0.694
recJ
single-stranded-DNA-specific exonuclease RecJ; Identified by similarity to SP:P21893; match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.
     
 0.676
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.