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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ats-1Anaplasma Translocated Substrate 1 (Ats-1); Name change according to the cited literature and GenBank accession number FJ210653. Edited start site from 912788 to 912419. PMID: 20174550. (376 aa)    
Predicted Functional Partners:
APH_0860
HIT family protein; Identified by match to protein family HMM PF01230.
       0.815
ankA
Ankyrin-repeat protein AnkA; Name change according to the cited literature. PMID: 10921951, 10948155, 17587335.
      
 0.620
APH_0858
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
virD4
Type IV secretion system protein VirD4; Identified by similarity to GB:AAM00422.1; match to protein family HMM PF02534.
      
 0.568
ccmA
Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
      
 0.545
APH_0215
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.545
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
      
 0.526
cycM
Cytochrome C, membrane-bound; Identified by similarity to SP:P30323; match to protein family HMM PF00034.
      
 0.510
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.419
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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