STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_0906Hypothetical protein; Identified by Glimmer2; putative. (1528 aa)    
Predicted Functional Partners:
APH_0160
Putative thymidylate synthase, flavin-dependent, truncated; Identified by similarity to GB:AAU03772.1.
      
 0.546
APH_0820
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.546
APH_0062
Conserved hypothetical protein; Identified by similarity to GB:AAL02641.1; match to protein family HMM PF06242.
      
 0.545
APH_0783
Conserved domain protein.
      
 0.545
APH_0805
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.545
APH_0382
HGE-14 protein; Identified by similarity to GB:AAK69700.1.
      
 0.538
APH_0385
HGE-14 protein; Identified by similarity to GB:AAK69700.1.
      
 0.538
APH_0455
HGE-14 protein; Identified by similarity to GB:AAK69700.1.
      
 0.489
thyX
Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
      
 0.483
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.482
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.