STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_0985Putative lipoprotein. (178 aa)    
Predicted Functional Partners:
APH_1213
Thiol:disulfide interchange protein, truncated; Identified by similarity to GB:AAM35423.1.
 
     0.751
holA
DNA polymerase III, delta subunit; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144.
  
     0.652
APH_1218
DNA-binding protein; Identified by similarity to GB:AAN15209.1; match to protein family HMM PF01381.
  
     0.634
APH_0208
Peptidase, M48 family; Identified by match to protein family HMM PF01435; match to protein family HMM PF07719.
  
   
 0.631
APH_0561
Putative thiol-disulfide oxidoreductase; Identified by similarity to SP:P35160.
  
  
 0.572
APH_0232
Dioxygenase family protein; Identified by similarity to SP:P15110; match to protein family HMM PF00775.
      
 0.549
APH_0687
Cytochrome c biogenesis family protein; Possible subunit of a heme lyase.
      
 0.549
APH_0957
CBS/transporter associated domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
      
 0.549
APH_1148
Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.
      
 0.549
APH_0617
Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1.
  
     0.526
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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