STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_1100Identified by match to protein family HMM PF01381. (212 aa)    
Predicted Functional Partners:
ctrA
DNA-binding response regulator CtrA; Name change according to the cited literature. PMID: 16882029.
     
 0.728
APH_1323
Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098.
  
     0.711
APH_0021
Putative hemolysin; Identified by similarity to SP:Q54318; match to protein family HMM PF00571; match to protein family HMM PF03471.
      
 0.603
APH_0074
Conserved hypothetical protein; Identified by similarity to GB:AAS14910.1.
  
     0.591
APH_0110
Acetamidase/formamidase family protein.
  
     0.585
typA
GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394.
      
 0.562
pleD
Response regulator/GGDEF domain protein PleD; Name change according to the cited literature. PMID: 16882029.
      
 0.546
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
      
 0.509
APH_1339
Conserved domain protein.
  
     0.455
APH_0849
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
 
     0.442
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.