STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB4-2Type IV secretion system protein VirB4-2; Name change from VirB4-1 to VirB4-2. PMID: 20670295. (777 aa)    
Predicted Functional Partners:
virB10
Type IV secretion system protein VirB10; Identified by similarity to GB:AAM00418.1; match to protein family HMM PF03743.
 
 
 0.983
virB8-1
Type IV secretion protein VirB8-1; Name change from VirB8-2 to VirB8-1. PMID: 20670295.
 
 
 0.964
virB4-1
Type IV secretion system protein VirB4 (VirB4-1); Name change from VirB4-1 to VirB4-2. PMID: 20670295.
  
  
0.933
virB3
Type IV secretion system protein VirB3; Identified by similarity to GB:AAM00406.1; match to protein family HMM PF05101.
  
 
 0.932
virB9-1
Type IV secretion system protein VirB9 (VirB9-1); Name change from VirB9-2 to VirB9-1. PMID: 20670295.
 
  
 0.925
virB9-2
Type IV secretion system protein VirB9-2; Name change from VirB9-1 to VirB9-2. PMID: 20670295.
 
  
 0.921
virB8-2
Type IV secretion system protein VirB8-2; Name change from VirB8-1 to VirB8-2. PMID: 20670295.
  
 
 0.841
virD4
Type IV secretion system protein VirD4; Identified by similarity to GB:AAM00422.1; match to protein family HMM PF02534.
 
  
 0.837
virB6-1
Type IV secretion system protein VirB6-1; Name change from VirB6 to VirB6-1. PMID: 18952796, 20670295.
  
 
 0.828
virB6-4
Type IV secretion system protein VirB6 family (VirB6-4); Name change from VirB6 to VirB6-4. PMID: 18952796, 20670295.
  
 
 0.788
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.