STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_1204Cytochrome c-type biogenesis protein, truncated; Identified by similarity to SP:P45403. (122 aa)    
Predicted Functional Partners:
APH_0141
Putative thiol:disulfide oxidoreductase; Identified by similarity to SP:P33926.
 
  
 0.835
APH_0687
Cytochrome c biogenesis family protein; Possible subunit of a heme lyase.
 
  
 0.718
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
 
 0.695
APH_0923
Disulfide bond formation protein, DsbB family; Identified by match to protein family HMM PF02600.
  
   
 0.539
p44-34b
P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
       0.519
ccmC
Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.434
APH_0561
Putative thiol-disulfide oxidoreductase; Identified by similarity to SP:P35160.
  
  
 0.429
APH_1201
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
p44-77
P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
       0.414
APH_0775
Conserved hypothetical protein; Identified by similarity to PIR:E97838; match to protein family HMM PF07031.
  
     0.409
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.