STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_1303comF family protein. (217 aa)    
Predicted Functional Partners:
APH_0933
Putative DNA processing protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
 
 
 0.883
APH_0306
Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
 
  
 0.836
xerD
Tyrosine recombinase XerD; Identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
   
    0.714
xerC
Tyrosine recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
   
    0.714
APH_1304
Hypothetical protein; Identified by Glimmer2; putative.
       0.709
APH_0754
Magnesium chelatase, subunit D/I family, ComM subfamily; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.
 
  
 0.622
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.618
radC
DNA repair protein RadC; Identified by similarity to SP:P25531; match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.
  
    0.608
APH_1306
Conserved hypothetical protein; Identified by similarity to GB:AAS14896.1.
  
    0.595
APH_1305
Glutathione-regulated potassium-efflux system protein; Identified by similarity to SP:P45522; match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.563
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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