STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_1323Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098. (205 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.814
APH_1339
Conserved domain protein.
  
     0.746
APH_1100
Identified by match to protein family HMM PF01381.
  
     0.711
APH_1190
Putative ATP synthase F0, B' subunit.
  
     0.700
APH_0110
Acetamidase/formamidase family protein.
  
     0.690
APH_0849
Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
  
     0.660
APH_0074
Conserved hypothetical protein; Identified by similarity to GB:AAS14910.1.
  
     0.650
APH_0634
Phage conserved hypothetical protein, phiE125 gp8 family; Identified by match to protein family HMM TIGR02215.
  
     0.580
APH_0259
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
     0.578
APH_0709
Ankyrin repeat protein; Identified by similarity to GB:AAP34830.1; match to protein family HMM PF00023.
  
     0.532
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.