APH_1345 protein (Anaplasma phagocytophilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

APH_1345

Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family. (233 aa)

Predicted Functional Partners:

APH_1344

0.796

APH_1347

0.425

APH_1346

0.421

dnaX

0.416

Your Current Organism:

Anaplasma phagocytophilum

NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APH_1344	APH_1345	APH_1344	APH_1345	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	0.796
APH_1344	APH_1347	APH_1344	APH_1347	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	0.412
APH_1344	dnaX	APH_1344	APH_1348	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.434
APH_1345	APH_1344	APH_1345	APH_1344	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.796
APH_1345	APH_1346	APH_1345	APH_1346	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	0.421
APH_1345	APH_1347	APH_1345	APH_1347	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	0.425
APH_1345	dnaX	APH_1345	APH_1348	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.416
APH_1346	APH_1345	APH_1346	APH_1345	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	0.421
APH_1346	APH_1347	APH_1346	APH_1347	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	0.799
APH_1346	dnaX	APH_1346	APH_1348	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.786
APH_1347	APH_1344	APH_1347	APH_1344	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.412
APH_1347	APH_1345	APH_1347	APH_1345	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	0.425
APH_1347	APH_1346	APH_1347	APH_1346	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	0.799
APH_1347	dnaX	APH_1347	APH_1348	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.913
dnaX	APH_1344	APH_1348	APH_1344	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.	0.434
dnaX	APH_1345	APH_1348	APH_1345	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.	0.416
dnaX	APH_1346	APH_1348	APH_1346	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.	0.786
dnaX	APH_1347	APH_1348	APH_1347	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.	0.913

Server load: low (38%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About