STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OnM2_046059Putative c2h2 type zinc finger containing protein. (374 aa)    
Predicted Functional Partners:
OnM2_047005
25S rRNA-methyltransferase.
   
 0.749
OnM2_025004
Transcription factor tau subunit sfc4.
    
 0.714
OnM2_014009
Nucleoside diphosphate kinase.
    
 0.709
OnM2_053008
CHD3-type chromatin-remodeling factor PICKLE.
   
 0.708
OnM2_096022
37S ribosomal protein MRP4, mitochondrial.
   
  0.705
OnM2_081005
37S ribosomal protein S18, mitochondrial.
    
  0.705
OnM2_069002b
Ribosomal protein S16, mitochondrial.
   
 0.704
OnM2_025045
Putative ribosomal protein s15.
   
  0.704
OnM2_059008
37S ribosomal protein MRP17, mitochondrial.
    
  0.702
OnM2_057001
Putative 37S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
    
 0.702
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.