STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OnM2_041004ATP-dependent RNA helicase mrh4, mitochondrial. (602 aa)    
Predicted Functional Partners:
OnM2_059016
Pre-mRNA-splicing factor prp1.
    
 0.912
OnM2_024098
Pre-mRNA-splicing factor cwf10.
   
 0.908
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.824
OnM2_050026
Pre-mRNA-splicing factor cef-1.
    
 
 0.809
OnM2_080032
Putative calcium homeostasis endoplasmic reticulum protein.
    
 0.785
OnM2_028021
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.783
OnM2_056007
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.768
OnM2_028068
ATP synthase subunit gamma.
   
 
 0.763
OnM2_077022
Nucleoporin NUP56.
   
 0.761
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.761
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.