STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OnM2_037070Kelch repeat-containing protein 3. (702 aa)    
Predicted Functional Partners:
OnM2_101017
U3 small nucleolar RNA-associated protein 6.
   
    0.493
OnM2_035089
Pre-rRNA-processing protein PNO1.
    
   0.493
OnM2_024065
Ribosome biogenesis protein NOC1.
   
    0.485
OnM2_052034
DNA-dependent metalloprotease WSS1-like protein.
 
      0.456
OnM2_041052
Putative RNA-binding protein C4F6.14.
   
    0.451
OnM2_045005
Ribosome production factor 2-like protein.
   
    0.441
OnM2_035027
Ribosome biogenesis protein BMS1.
   
    0.435
OnM2_099019
25S rRNA-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
    0.433
OnM2_026080
Periodic tryptophan protein 2-like protein.
   
    0.428
OnM2_100011
Protein MAK16; Belongs to the MAK16 family.
   
    0.424
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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