STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)    
Predicted Functional Partners:
OnM2_094027
54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.
   
 
 0.999
OnM2_090042
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
OnM2_088017
60S ribosomal protein L8-B.
   
 0.999
OnM2_086056
60S ribosomal protein L25.
   
 0.999
OnM2_086018
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
OnM2_086055
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.999
OnM2_072025
Putative 60S ribosomal protein L28e.
   
 
 0.999
OnM2_072010
60S ribosomal protein L31-B.
  
 
 0.999
OnM2_069020
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
   
 0.999
OnM2_064062
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.999
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.