STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OnM2_025124Carboxylesterase patB. (386 aa)    
Predicted Functional Partners:
OnM2_056020
Glycerophosphocholine phosphodiesterase GDE1.
    
 0.834
OnM2_021024
Ankyrin repeat protein nuc-2.
    
 0.762
OnM2_071001
U3 small nucleolar RNA-associated protein 20.
   
 0.742
OnM2_077068
Putative glutamate carboxypeptidase.
  
 0.723
OnM2_023039
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.706
OnM2_011028
U3 small nucleolar RNA-associated protein 5.
   
 0.705
OnM2_039004
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.701
OnM2_077058
Protein sof1.
    
  0.700
OnM2_068061
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.700
OnM2_061068
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.700
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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