STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OnM2_017010Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (437 aa)    
Predicted Functional Partners:
OnM2_035065
Multisubstrate pseudouridine synthase 7.
    
 
 0.936
OnM2_055073
Bifunctional protein RIB2.
  
 0.928
OnM2_074036
tRNA modification GTPase MnmE.
  
 
 0.924
OnM2_072021
Putative rna methyltransferase.
  
 
 0.920
OnM2_062003
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.902
OnM2_015021
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.898
OnM2_090016
Putative GTP-binding protein EngB.
   
 
 0.894
OnM2_025015
60S ribosomal protein L26-2.
   
   0.894
OnM2_021027
54S ribosomal protein L9, mitochondrial.
   
 
 0.891
OnM2_023098
54S ribosomal protein L23, mitochondrial.
  
   0.886
Your Current Organism:
Oidium neolycopersici
NCBI taxonomy Id: 212602
Other names: O. neolycopersici
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