STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTC_00082Conserved protein. (133 aa)    
Predicted Functional Partners:
CTC_00083
Dehydrogenase, FAD-dependent.
 
    0.963
CTC_02436
Glycerol-3-phosphate dehydrogenase.
 
    0.827
CTC_01808
Glycerol-3-phosphate dehydrogenase.
 
    0.807
CTC_02435
Sarcosine oxidase alpha subunit.
 
    0.792
CTC_00084
Sensor histidine kinase.
       0.773
CTC_01381
Dihydroorotate dehydrogenase electron transfer subunit.
   
    0.687
CTC_00086
Conserved membrane protein.
       0.682
CTC_00087
Transcriptional regulator.
       0.627
CTC_01759
Glycerol uptake operon antiterminator regulatory protein.
 
    0.618
CTC_00088
Conserved protein.
       0.614
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.