Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CTC_00467 | CTC_00468 | Hypothetical protein. | Predicted transglutaminase/protease. | 0.781 |
CTC_00467 | CTC_00469 | Hypothetical protein. | Predicted transglutaminase/protease. | 0.620 |
CTC_00467 | CTC_00470 | Hypothetical protein. | Hypothetical protein. | 0.681 |
CTC_00467 | CTC_00471 | Hypothetical protein. | Putative S-layer protein (peptidoglycan anchored). | 0.626 |
CTC_00468 | CTC_00467 | Predicted transglutaminase/protease. | Hypothetical protein. | 0.781 |
CTC_00468 | CTC_00469 | Predicted transglutaminase/protease. | Predicted transglutaminase/protease. | 0.434 |
CTC_00468 | CTC_00470 | Predicted transglutaminase/protease. | Hypothetical protein. | 0.620 |
CTC_00468 | CTC_00471 | Predicted transglutaminase/protease. | Putative S-layer protein (peptidoglycan anchored). | 0.633 |
CTC_00469 | CTC_00467 | Predicted transglutaminase/protease. | Hypothetical protein. | 0.620 |
CTC_00469 | CTC_00468 | Predicted transglutaminase/protease. | Predicted transglutaminase/protease. | 0.434 |
CTC_00469 | CTC_00470 | Predicted transglutaminase/protease. | Hypothetical protein. | 0.770 |
CTC_00469 | CTC_00471 | Predicted transglutaminase/protease. | Putative S-layer protein (peptidoglycan anchored). | 0.633 |
CTC_00470 | CTC_00467 | Hypothetical protein. | Hypothetical protein. | 0.681 |
CTC_00470 | CTC_00468 | Hypothetical protein. | Predicted transglutaminase/protease. | 0.620 |
CTC_00470 | CTC_00469 | Hypothetical protein. | Predicted transglutaminase/protease. | 0.770 |
CTC_00470 | CTC_00471 | Hypothetical protein. | Putative S-layer protein (peptidoglycan anchored). | 0.613 |
CTC_00471 | CTC_00467 | Putative S-layer protein (peptidoglycan anchored). | Hypothetical protein. | 0.626 |
CTC_00471 | CTC_00468 | Putative S-layer protein (peptidoglycan anchored). | Predicted transglutaminase/protease. | 0.633 |
CTC_00471 | CTC_00469 | Putative S-layer protein (peptidoglycan anchored). | Predicted transglutaminase/protease. | 0.633 |
CTC_00471 | CTC_00470 | Putative S-layer protein (peptidoglycan anchored). | Hypothetical protein. | 0.613 |