STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTC_01088Membrane spanning protein. (157 aa)    
Predicted Functional Partners:
CTC_01089
Conserved protein.
       0.651
CTC_01085
Phage terminase small subunit.
       0.598
CTC_01086
Phage terminase large subunit.
       0.598
CTC_01087
Conserved protein.
       0.598
fliL
Putative flagellar protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.514
CTC_00459
Conserved membrane protein.
   
  
 0.513
CTC_01084
Hypothetical protein.
       0.491
cinA
Putative competence-damage protein; Belongs to the CinA family.
       0.457
CTC_00671
Riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.431
CTC_01673
Flagellum-specific ATP synthase.
   
    0.412
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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