STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlpA-2Methyl-accepting chemotaxis protein tlpA. (571 aa)    
Predicted Functional Partners:
cheR
Chemotaxis protein methyltransferase cheR.
 
 0.985
CTC_01733
Protein-glutamate methylesterase.
 
 0.984
cheA
Chemotaxis protein cheA.
 
 0.982
cheW
Putative chemotaxis protein cheW.
 
 0.976
cheW-2
Chemotaxis protein cheW.
 
 0.976
cheD
Chemotaxis protein cheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.975
cheY
Chemotaxis protein cheY.
 
  
  0.933
dut
Deoxyuridine 5-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.574
fliN
Flagellar motor switch protein fliN.
 
 
 0.551
CTC_01212
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
       0.535
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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