Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTC_01310 | CTC_01311 | CTC_01310 | CTC_01311 | Acetyltransferase. | Spore coat protein S. | 0.819 |
CTC_01310 | CTC_01317 | CTC_01310 | CTC_01317 | Acetyltransferase. | NAD(FAD)-utilizing dehydrogenase. | 0.500 |
CTC_01310 | cmk | CTC_01310 | CTC_01315 | Acetyltransferase. | Cytidylate kinase. | 0.533 |
CTC_01310 | ispH | CTC_01310 | CTC_01314 | Acetyltransferase. | Conserved protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. In the N-terminal section; belongs to the IspH family. | 0.533 |
CTC_01310 | speH | CTC_01310 | CTC_01312 | Acetyltransferase. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.615 |
CTC_01311 | CTC_01310 | CTC_01311 | CTC_01310 | Spore coat protein S. | Acetyltransferase. | 0.819 |
CTC_01311 | CTC_01317 | CTC_01311 | CTC_01317 | Spore coat protein S. | NAD(FAD)-utilizing dehydrogenase. | 0.454 |
CTC_01311 | cmk | CTC_01311 | CTC_01315 | Spore coat protein S. | Cytidylate kinase. | 0.549 |
CTC_01311 | ispH | CTC_01311 | CTC_01314 | Spore coat protein S. | Conserved protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. In the N-terminal section; belongs to the IspH family. | 0.505 |
CTC_01311 | speH | CTC_01311 | CTC_01312 | Spore coat protein S. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.649 |
CTC_01317 | CTC_01310 | CTC_01317 | CTC_01310 | NAD(FAD)-utilizing dehydrogenase. | Acetyltransferase. | 0.500 |
CTC_01317 | CTC_01311 | CTC_01317 | CTC_01311 | NAD(FAD)-utilizing dehydrogenase. | Spore coat protein S. | 0.454 |
CTC_01317 | cmk | CTC_01317 | CTC_01315 | NAD(FAD)-utilizing dehydrogenase. | Cytidylate kinase. | 0.733 |
CTC_01317 | ispH | CTC_01317 | CTC_01314 | NAD(FAD)-utilizing dehydrogenase. | Conserved protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. In the N-terminal section; belongs to the IspH family. | 0.710 |
CTC_01317 | speH | CTC_01317 | CTC_01312 | NAD(FAD)-utilizing dehydrogenase. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.441 |
CTC_02489 | fliN | CTC_02489 | CTC_01726 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Flagellar motor switch protein fliN. | 0.808 |
CTC_02489 | ispH | CTC_02489 | CTC_01314 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Conserved protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. In the N-terminal section; belongs to the IspH family. | 0.839 |
CTC_02489 | metK | CTC_02489 | CTC_00321 | Pyruvate kinase; Belongs to the pyruvate kinase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.498 |
CTC_02489 | speH | CTC_02489 | CTC_01312 | Pyruvate kinase; Belongs to the pyruvate kinase family. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.404 |
cmk | CTC_01310 | CTC_01315 | CTC_01310 | Cytidylate kinase. | Acetyltransferase. | 0.533 |
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