STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTC_01340Sodium/proton antiporter. (121 aa)    
Predicted Functional Partners:
shaD
Sodium/proton antiporter shaD.
 
 
 0.998
CTC_01341
Sodium/proton antiporter.
 
 
 0.998
shaA
Sodium/proton antiporter shaA.
 
 
 0.997
shaA-2
Sodium/proton antiporter shaA.
 
 
 0.997
shaE
Sodium/proton antiporter shaE.
 
 
 0.997
rnfB
rnfB/polyferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.783
CTC_01336
Conserved protein.
       0.479
moxR-4
Conserved protein; Similar to moxR.
       0.478
CTC_01334
Conserved protein, putative metal-dependent peptidase.
       0.477
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.