Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTC_01673 | CTC_01715 | CTC_01673 | CTC_01715 | Flagellum-specific ATP synthase. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.954 |
CTC_01673 | CTC_01722 | CTC_01673 | CTC_01722 | Flagellum-specific ATP synthase. | Flagellar hook-associated protein 3. | 0.973 |
CTC_01673 | flgD | CTC_01673 | CTC_01669 | Flagellum-specific ATP synthase. | Putative basal-body rod modification protein flgD. | 0.993 |
CTC_01673 | flgG | CTC_01673 | CTC_01650 | Flagellum-specific ATP synthase. | Flagellar basal-body rod protein flgG. | 0.971 |
CTC_01673 | flgK | CTC_01673 | CTC_01724 | Flagellum-specific ATP synthase. | Flagellar hook-associated protein 1. | 0.986 |
CTC_01673 | flhA | CTC_01673 | CTC_01657 | Flagellum-specific ATP synthase. | Flagellar biosynthetic protein flhA. | 0.990 |
CTC_01673 | fliD | CTC_01673 | CTC_01718 | Flagellum-specific ATP synthase. | Flagellar cap protein fliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.975 |
CTC_01673 | fliN | CTC_01673 | CTC_01726 | Flagellum-specific ATP synthase. | Flagellar motor switch protein fliN. | 0.999 |
CTC_01673 | fliR | CTC_01673 | CTC_01660 | Flagellum-specific ATP synthase. | Flagellar biosynthetic protein fliR/B; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.999 |
CTC_01673 | fliS | CTC_01673 | CTC_01719 | Flagellum-specific ATP synthase. | Flagellar protein fliS. | 0.990 |
CTC_01715 | CTC_01673 | CTC_01715 | CTC_01673 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellum-specific ATP synthase. | 0.954 |
CTC_01715 | CTC_01722 | CTC_01715 | CTC_01722 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein 3. | 0.907 |
CTC_01715 | flgD | CTC_01715 | CTC_01669 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Putative basal-body rod modification protein flgD. | 0.890 |
CTC_01715 | flgG | CTC_01715 | CTC_01650 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar basal-body rod protein flgG. | 0.928 |
CTC_01715 | flgK | CTC_01715 | CTC_01724 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein 1. | 0.969 |
CTC_01715 | flhA | CTC_01715 | CTC_01657 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar biosynthetic protein flhA. | 0.908 |
CTC_01715 | fliD | CTC_01715 | CTC_01718 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar cap protein fliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.946 |
CTC_01715 | fliN | CTC_01715 | CTC_01726 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor switch protein fliN. | 0.971 |
CTC_01715 | fliR | CTC_01715 | CTC_01660 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar biosynthetic protein fliR/B; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.956 |
CTC_01715 | fliS | CTC_01715 | CTC_01719 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar protein fliS. | 0.989 |
page 1 of 6