Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CTC_00876 | CTC_01874 | Copper efflux ATPase. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.471 |
CTC_01869 | CTC_01870 | Hypothetical protein. | Hypothetical protein. | 0.701 |
CTC_01869 | CTC_01872 | Hypothetical protein. | Putative N-acetylmuramoyl-L-alanine amidase. | 0.673 |
CTC_01869 | CTC_01873 | Hypothetical protein. | Conserved protein. | 0.440 |
CTC_01869 | CTC_01874 | Hypothetical protein. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.401 |
CTC_01870 | CTC_01869 | Hypothetical protein. | Hypothetical protein. | 0.701 |
CTC_01870 | CTC_01872 | Hypothetical protein. | Putative N-acetylmuramoyl-L-alanine amidase. | 0.741 |
CTC_01870 | CTC_01873 | Hypothetical protein. | Conserved protein. | 0.494 |
CTC_01870 | CTC_01874 | Hypothetical protein. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.464 |
CTC_01870 | CTC_01875 | Hypothetical protein. | Flavodoxin. | 0.414 |
CTC_01872 | CTC_01869 | Putative N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.673 |
CTC_01872 | CTC_01870 | Putative N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.741 |
CTC_01872 | CTC_01873 | Putative N-acetylmuramoyl-L-alanine amidase. | Conserved protein. | 0.497 |
CTC_01872 | CTC_01874 | Putative N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.451 |
CTC_01872 | CTC_01875 | Putative N-acetylmuramoyl-L-alanine amidase. | Flavodoxin. | 0.428 |
CTC_01873 | CTC_01869 | Conserved protein. | Hypothetical protein. | 0.440 |
CTC_01873 | CTC_01870 | Conserved protein. | Hypothetical protein. | 0.494 |
CTC_01873 | CTC_01872 | Conserved protein. | Putative N-acetylmuramoyl-L-alanine amidase. | 0.497 |
CTC_01873 | CTC_01874 | Conserved protein. | Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.813 |
CTC_01873 | CTC_01875 | Conserved protein. | Flavodoxin. | 0.725 |
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