Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CTC_02065Putative stage IV sporulation protein FB, predicted metalloprotease. (282 aa)    
Predicted Functional Partners:
CTC_02066
Cell wall endopeptidase, family M23/M37.
       0.785
rodA
Rod shape-determining protein rodA; Belongs to the SEDS family.
  
  
 0.639
CTC_02063
Conserved protein.
       0.603
CTC_02064
Fe-S oxidoreductase.
       0.603
CTC_02062
Ribonuclease G.
       0.576
CTC_01533
Stage II sporulation protein M.
  
  
 0.561
CTC_01125
Putative sporulation sigma-E factor processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.523
rpmA
LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.
       0.520
CTC_02059
Hypothetical protein.
       0.520
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.520
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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