STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTC_02095Spore germination protein KC. (383 aa)    
Predicted Functional Partners:
CTC_02094
Spore germination protein KB.
 
  
 0.960
CTC_02096
Spore germination protein KA.
 
  
 0.953
CTC_02448
Spore germination protein KA.
 
  
 0.807
CTC_00285
Spore germination protein B1.
 
  
 0.770
CTC_00290
Conserved membrane-associated protein.
 
     0.768
CTC_01776
Spore germination protein KA.
 
  
 0.764
CTC_00286
Spore germination protein A2.
 
  
 0.745
CTC_00350
Spore-cortex-lytic enzyme precursor.
 
  
 0.725
CTC_00595
gamma-D-glutamyl-L-diamino acid endopeptidase I; Zinc-peptidase.
  
     0.697
CTC_01778
Spore germination protein KB.
 
  
 0.655
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.