STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTC_02463NAD-dependent malic enzyme. (391 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.976
CTC_02489
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.969
CTC_02561
Fumarate hydratase subunit B.
 
 
 0.948
CTC_02047
Dihydrolipoamide dehydrogenase.
  
 
 0.944
CTC_01159
Pyruvate-flavodoxin oxidoreductase.
    
 0.943
CTC_01741
Pyruvate-flavodoxin oxidoreductase.
    
 0.943
CTC_02224
Pyruvate carboxylase.
   
 0.936
CTC_02562
Fumarate hydratase subunit A.
  
 
 0.924
CTC_02014
Pyruvate,phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.919
CTC_01239
Phosphate acetyltransferase.
 
 
  
 0.914
Your Current Organism:
Clostridium tetani
NCBI taxonomy Id: 212717
Other names: C. tetani E88, Clostridium tetani E88, Clostridium tetani str. E88
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