Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB20562.1Putative membrane protein; PFAM: Transglycosylase associated protein. (94 aa)    
Predicted Functional Partners:
AGB20561.1
Hypothetical protein.
       0.520
egtD
Putative methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.499
AGB24438.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE).
  
  
 0.495
AGB26493.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); Phosphoserine phosphatase RsbU, N-terminal domain; PAS fold; TIGRFAM: PAS domain S-box.
  
  
 0.495
AGB22949.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.477
AGB20507.1
Hypothetical protein; PFAM: CsbD-like; manually curated; Belongs to the UPF0337 (CsbD) family.
  
  
 0.467
AGB21732.1
PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.467
AGB22530.1
PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.467
AGB22906.1
PFAM: CsbD-like.
  
  
 0.467
AGB21572.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily.
  
  
 0.462
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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