Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB20689.1ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (314 aa)    
Predicted Functional Partners:
AGB22537.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
  
 0.853
AGB20687.1
PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein.
     
 0.833
AGB20688.1
Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.802
AGB20686.1
Biotin-dependent carboxylase-like protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain.
       0.756
AGB22695.1
PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain.
 
  
 0.629
AGB20681.1
Hypothetical protein; PFAM: CbiX.
 
  
 0.583
AGB22411.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
    
 0.578
AGB26020.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
    
 0.578
AGB20685.1
Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family.
 
     0.574
AGB24022.1
ABC-type proline/glycine betaine transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
    
 0.565
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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