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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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AGB20720.1Putative DNA primase; PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain. (411 aa)    
Predicted Functional Partners:
ku
Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
  
 0.888
AGB26241.1
PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region.
   
 0.872
AGB26242.1
PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region.
   
 0.847
lig
ATP-dependent DNA ligase I; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
 
   
 0.743
AGB20721.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
       0.575
AGB20719.1
Hypothetical protein.
       0.527
AGB20689.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.489
AGB20687.1
PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein.
       0.465
AGB25497.1
PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family.
  
   
 0.439
AGB26393.1
PHP family phosphohydrolase, histidinol phosphatase; PFAM: PHP domain.
 
   
 0.419
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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