STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB20766.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (832 aa)    
Predicted Functional Partners:
AGB20767.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.991
AGB21576.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.919
AGB23168.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter; Cyclic nucleotide-binding domain.
 
 0.879
AGB22707.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.866
AGB26574.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.861
AGB26573.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 0.842
AGB22706.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.801
AGB24132.1
Hypothetical protein.
 
  
 0.639
AGB21481.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III.
 
  
 0.619
AGB22928.1
Hypothetical protein.
 
     0.615
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.