Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
gene fusions
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[Homology]
Score
AGB20970.1Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain. (193 aa)    
Predicted Functional Partners:
AGB20971.1
PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955).
     
 0.863
AGB20972.1
PFAM: Acyl-ACP thioesterase.
 
     0.806
AGB22252.1
PFAM: Lyase; Adenylosuccinate lyase C-terminus.
     
 0.674
AGB22345.1
PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase.
  
 
 0.663
AGB20969.1
Hypothetical protein.
       0.570
AGB21799.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.507
AGB20912.1
Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
    0.505
AGB25641.1
PFAM: P-aminobenzoate N-oxygenase AurF.
  
   
 0.490
AGB21854.1
Lysophospholipase; PFAM: alpha/beta hydrolase fold.
 
 
 0.486
AGB24643.1
Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
    0.479
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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