Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB20982.1PFAM: Protein of unknown function (DUF2599). (145 aa)    
Predicted Functional Partners:
AGB20981.1
PFAM: Protein of unknown function (DUF2516).
       0.861
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
    0.845
AGB20980.1
Hypothetical protein.
 
   
 0.840
AGB20979.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
  
 0.776
AGB23314.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.665
AGB26400.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.665
AGB26335.1
PFAM: Mycobacterial cell wall arabinan synthesis protein.
 
 0.645
AGB26334.1
PFAM: Mycobacterial cell wall arabinan synthesis protein.
 
 0.636
AGB26336.1
PFAM: Mycobacterial cell wall arabinan synthesis protein.
 
 0.636
AGB26636.1
Hypothetical protein.
 
 0.624
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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