Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB20985.1Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase. (274 aa)    
Predicted Functional Partners:
AGB20984.1
Hypothetical protein.
       0.861
AGB20986.1
Hypothetical protein; Manually curated; non-canonical start codon.
       0.817
AGB20988.1
PFAM: Protein of unknown function (DUF2505).
 
     0.795
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
 0.727
AGB20987.1
PFAM: Protein of unknown function (DUF2505).
 
     0.701
AGB20990.1
Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain.
  
    0.684
AGB24176.1
PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.
  
 0.674
AGB23054.1
PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.621
AGB26245.1
4-aminobutyrate aminotransferase family protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.613
AGB26001.1
PFAM: Aminotransferase class I and II.
 
 
 0.596
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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