Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21121.1Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family. (339 aa)    
Predicted Functional Partners:
AGB21122.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family.
 
    
0.883
AGB21465.1
Putative ATPase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory proteins, luxR family.
  
  
 0.795
AGB22508.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
   
    0.785
AGB26369.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
   
    0.754
AGB24263.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family.
 
     0.750
menC
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
       0.740
cobB-3
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.728
AGB25339.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
   
  
 0.723
AGB20702.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family.
   
  
 0.722
AGB21483.1
Transcriptional regulator; PFAM: MarR family.
   
  
 0.715
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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