Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21138.1PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family. (400 aa)    
Predicted Functional Partners:
AGB21139.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 0.898
AGB21137.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
     
 0.740
AGB26349.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
 
 
 0.729
htpX
Heat shock protein; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.
     
 0.692
AGB22559.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.619
AGB24138.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 0.610
AGB25133.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; manually curated; Belongs to the FPP/GGPP synthase family.
 
 0.598
AGB22560.1
Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.518
AGB22801.1
Mg-chelatase subunit ChlI; PFAM: von Willebrand factor type A domain; AAA domain (dynein-related subfamily).
  
  
 0.508
AGB22597.1
Phytoene dehydrogenase-like oxidoreductase; PFAM: Thi4 family.
  
 
 0.505
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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