Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB21331.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
AGB21332.1
Uncharacterized membrane-bound protein; PFAM: Telomeric repeat-binding factor 2; Protein of unknown function (DUF2510).
       0.723
AGB21334.1
PFAM: Protein of unknown function DUF88.
     
 0.582
AGB21333.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
       0.559
AGB21330.1
PFAM: Uncharacterized conserved protein (DUF2235).
       0.518
AGB26306.1
PFAM: Protein of unknown function (DUF419).
       0.489
AGB20648.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; manually curated.
     
 0.481
AGB24074.1
Muramidase (flagellum-specific); PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Peptidase M15.
     
 0.421
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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