Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21333.1Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. (236 aa)    
Predicted Functional Partners:
AGB21334.1
PFAM: Protein of unknown function DUF88.
       0.780
AGB23555.1
Hypothetical protein.
     
  0.633
AGB21328.1
enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family.
  
    0.622
AGB21332.1
Uncharacterized membrane-bound protein; PFAM: Telomeric repeat-binding factor 2; Protein of unknown function (DUF2510).
       0.592
AGB21851.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family.
  
 0.587
AGB21331.1
Hypothetical protein.
       0.559
AGB24034.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form.
  
 0.505
AGB21104.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
   
 0.493
AGB20971.1
PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955).
  
 
  0.479
AGB26378.1
PFAM: Helix-turn-helix.
  
 
  0.475
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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