STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB21338.1Hypothetical protein; Belongs to the UPF0336 family. (175 aa)    
Predicted Functional Partners:
AGB21337.1
Acyl dehydratase; PFAM: MaoC like domain.
 
 0.999
AGB26561.1
Acyl dehydratase; PFAM: MaoC like domain.
 
 
0.984
AGB21336.1
Hypothetical protein; Belongs to the UPF0336 family.
 
  
0.911
rpmG
PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.764
AGB24236.1
Regulator of polyketide synthase expression.
 
     0.741
AGB22663.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.731
AGB22949.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.709
AGB21040.1
PFAM: Catalase.
   
 0.708
AGB23910.1
PFAM: Catalase; Catalase-related immune-responsive.
   
 0.708
AGB23917.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.708
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.