Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21465.1Putative ATPase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory proteins, luxR family. (1091 aa)    
Predicted Functional Partners:
AGB24438.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE).
  
 0.891
AGB26493.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); Phosphoserine phosphatase RsbU, N-terminal domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 0.891
AGB25339.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.830
AGB25314.1
DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; FHA domain.
  
 0.828
AGB21121.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
  
 0.795
AGB21934.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.767
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.754
AGB22828.1
Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
  
 
 0.750
AGB26369.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
  
  
 0.748
AGB22508.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
  
    0.739
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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