Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21576.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (239 aa)    
Predicted Functional Partners:
AGB21575.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.973
AGB20766.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.881
AGB23169.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.877
AGB22705.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.746
AGB25704.1
Hypothetical protein.
  
 0.746
AGB22706.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.741
AGB26572.1
Putative ABC transport system permease protein; PFAM: Predicted permease.
  
 0.741
AGB21519.1
Hypothetical protein.
  
 0.681
AGB21489.1
PFAM: Domain of unknown function DUF222.
  
 0.656
AGB24209.1
PFAM: Domain of unknown function DUF222.
  
 0.656
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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