Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB21604.1PFAM: Bacterial regulatory proteins, tetR family. (200 aa)    
Predicted Functional Partners:
AGB20896.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.549
AGB21602.1
Hypothetical protein; PFAM: Zeta toxin.
       0.548
AGB21603.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.548
AGB23007.1
PFAM: Protein of unknown function (DUF2834).
  
     0.546
AGB21361.1
PFAM: Archaeal ATPase; Bacterial regulatory proteins, luxR family.
  
   
 0.523
AGB22179.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.515
AGB25269.1
ATP-dependent transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
  
   
 0.498
AGB20702.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family.
   
 
 0.489
AGB22857.1
PFAM: Protein of unknown function (DUF2834).
  
     0.464
AGB24838.1
DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
  
  
 0.455
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.