Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB21732.1PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family. (81 aa)    
Predicted Functional Partners:
AGB22949.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.485
AGB21572.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily.
  
  
 0.482
AGB23245.1
PFAM: Protein of unknown function (DUF1458).
   
    0.472
AGB23641.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 0.468
AGB20562.1
Putative membrane protein; PFAM: Transglycosylase associated protein.
  
  
 0.467
AGB23110.1
Putative membrane protein; PFAM: Transglycosylase associated protein.
  
  
 0.467
AGB23598.1
Putative membrane protein; PFAM: Transglycosylase associated protein.
  
  
 0.467
AGB21071.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.465
AGB23331.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.465
AGB26405.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.465
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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