STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB21763.1PFAM: Glycosyl transferase family 2. (282 aa)    
Predicted Functional Partners:
AGB21762.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 0.889
AGB21761.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 0.862
AGB21764.1
Hypothetical protein.
  
  
 0.808
AGB21765.1
Hypothetical protein.
  
  
 0.780
AGB21357.1
PFAM: Glycosyl transferase family 2.
  
     0.748
AGB21349.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 0.676
fcl
Nucleoside-diphosphate-sugar epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 0.652
AGB21345.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.635
AGB21746.1
PFAM: NAD dependent epimerase/dehydratase family.
 
 0.621
AGB21751.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.620
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.