STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB21805.1PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated. (548 aa)    
Predicted Functional Partners:
AGB21804.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.999
AGB20997.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.920
AGB25621.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.911
lpqB
Sporulation/spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
 
  
 0.910
AGB25462.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.909
AGB20593.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated.
 0.906
AGB25882.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; Response regulator receiver domain.
 0.902
AGB21088.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.900
AGB23531.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.898
AGB25872.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated.
 0.895
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.